Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PER1O15534 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PER1O15534 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PER1O15534 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.75□□□□□ -1.33
PER1O15534 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
PER1O15534 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PER1O15534 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.75□□□□□ -1.33
PER1O15534 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
PER1O15534 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
PER1O15534 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PER1O15534 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
PER1O15534 AC244517.1-201ENST00000606030 2086 ntBASIC6.74□□□□□ -1.33
PER1O15534 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.74□□□□□ -1.33
PER1O15534 RNU6-1252P-201ENST00000363054 104 ntBASIC6.74□□□□□ -1.33
PER1O15534 SNORA75B-201ENST00000384053 137 ntBASIC6.74□□□□□ -1.33
PER1O15534 MIR19A-201ENST00000384878 82 ntBASIC6.74□□□□□ -1.33
PER1O15534 Y_RNA.646-201ENST00000410980 101 ntBASIC6.74□□□□□ -1.33
PER1O15534 RNU4-61P-201ENST00000411243 107 ntBASIC6.74□□□□□ -1.33
PER1O15534 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.74□□□□□ -1.33
PER1O15534 HNRNPDLP1-201ENST00000412834 550 ntBASIC6.74□□□□□ -1.33
PER1O15534 RPL7P10-201ENST00000417407 739 ntBASIC6.74□□□□□ -1.33
PER1O15534 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.74□□□□□ -1.33
PER1O15534 RPL35AP21-201ENST00000437667 333 ntBASIC6.74□□□□□ -1.33
PER1O15534 FTH1P1-201ENST00000437933 532 ntBASIC6.74□□□□□ -1.33
PER1O15534 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC6.74□□□□□ -1.33
PER1O15534 RPL12P3-201ENST00000440080 396 ntBASIC6.74□□□□□ -1.33
PER1O15534 RPL21P133-201ENST00000443666 476 ntBASIC6.74□□□□□ -1.33
PER1O15534 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.74□□□□□ -1.33
PER1O15534 RPL21P89-201ENST00000444021 467 ntBASIC6.74□□□□□ -1.33
PER1O15534 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.74□□□□□ -1.33
PER1O15534 AL133244.1-201ENST00000456007 258 ntBASIC6.74□□□□□ -1.33
PER1O15534 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC6.74□□□□□ -1.33
PER1O15534 RPL7P43-201ENST00000478876 753 ntBASIC6.74□□□□□ -1.33
PER1O15534 AC012123.2-201ENST00000485809 248 ntBASIC6.74□□□□□ -1.33
PER1O15534 AC005912.1-201ENST00000495392 255 ntBASIC6.74□□□□□ -1.33
PER1O15534 NDUFB5P1-201ENST00000508134 564 ntBASIC6.74□□□□□ -1.33
PER1O15534 RNU6-635P-201ENST00000516651 102 ntBASIC6.74□□□□□ -1.33
PER1O15534 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.74□□□□□ -1.33
PER1O15534 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC6.74□□□□□ -1.33
PER1O15534 AC005868.1-201ENST00000536421 331 ntBASIC6.74□□□□□ -1.33
PER1O15534 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.74□□□□□ -1.33
PER1O15534 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.74□□□□□ -1.33
PER1O15534 AC005357.1-201ENST00000588399 301 ntBASIC6.74□□□□□ -1.33
PER1O15534 AC024940.4-201ENST00000605507 246 ntBASIC6.74□□□□□ -1.33
PER1O15534 EIF3FP1-201ENST00000613970 806 ntBASIC6.74□□□□□ -1.33
PER1O15534 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.74□□□□□ -1.33
PER1O15534 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.74□□□□□ -1.33
PER1O15534 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
PER1O15534 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
PER1O15534 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
PER1O15534 AL442639.1-201ENST00000625030 1899 ntBASIC6.74□□□□□ -1.33
PER1O15534 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PER1O15534 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.74□□□□□ -1.33
PER1O15534 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
PER1O15534 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PER1O15534 AC130650.2-201ENST00000618736 2403 ntBASIC6.74□□□□□ -1.33
PER1O15534 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.74□□□□□ -1.33
PER1O15534 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
PER1O15534 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PER1O15534 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PER1O15534 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PER1O15534 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.73□□□□□ -1.33
PER1O15534 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PER1O15534 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
PER1O15534 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PER1O15534 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PER1O15534 AC004158.1-201ENST00000564508 4319 ntBASIC6.73□□□□□ -1.33
PER1O15534 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PER1O15534 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PER1O15534 SNORD116-11-201ENST00000383882 92 ntBASIC6.73□□□□□ -1.33
PER1O15534 Y_RNA.489-201ENST00000384410 101 ntBASIC6.73□□□□□ -1.33
PER1O15534 RNU6-328P-201ENST00000390887 106 ntBASIC6.73□□□□□ -1.33
PER1O15534 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PER1O15534 POLHP1-201ENST00000411806 470 ntBASIC6.73□□□□□ -1.33
PER1O15534 TBCAP2-201ENST00000416175 326 ntBASIC6.73□□□□□ -1.33
PER1O15534 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PER1O15534 AL451139.1-201ENST00000434718 346 ntBASIC6.73□□□□□ -1.33
PER1O15534 RPS24P13-201ENST00000442520 397 ntBASIC6.73□□□□□ -1.33
PER1O15534 SNRPCP3-201ENST00000474888 476 ntBASIC6.73□□□□□ -1.33
PER1O15534 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.73□□□□□ -1.33
PER1O15534 AC110794.1-201ENST00000505816 425 ntBASIC6.73□□□□□ -1.33
PER1O15534 AC093853.1-201ENST00000515689 483 ntBASIC6.73□□□□□ -1.33
PER1O15534 AC105031.1-201ENST00000518550 476 ntBASIC6.73□□□□□ -1.33
PER1O15534 OR4P1P-201ENST00000530808 1136 ntBASIC6.73□□□□□ -1.33
PER1O15534 AC007485.1-201ENST00000616755 206 ntBASIC6.73□□□□□ -1.33
PER1O15534 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.73□□□□□ -1.33
PER1O15534 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.73□□□□□ -1.33
PER1O15534 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PER1O15534 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PER1O15534 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PER1O15534 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PER1O15534 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
PER1O15534 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.72□□□□□ -1.33
PER1O15534 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PER1O15534 AC100778.3-201ENST00000580060 1750 ntBASIC6.72□□□□□ -1.33
PER1O15534 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PER1O15534 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
PER1O15534 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.72□□□□□ -1.33
PER1O15534 SNORD3E-201ENST00000362899 217 ntBASIC6.72□□□□□ -1.33
PER1O15534 SNORA73.1-201ENST00000363107 205 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms