Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 SAR1AP4-201ENST00000429225 591 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AC004865.1-201ENST00000442276 1003 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AC233982.1-201ENST00000451247 436 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 RPS29P12-201ENST00000460178 152 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AC097462.2-201ENST00000504623 481 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AC091826.1-201ENST00000514065 313 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 SNORA9.3-201ENST00000516383 129 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AC104986.1-201ENST00000517978 436 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 MIR3605-201ENST00000583214 100 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AL355812.1-201ENST00000603215 216 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AC008277.2-201ENST00000605196 797 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AC009570.1-201ENST00000609599 745 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AC131902.3-201ENST00000611767 581 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 MIR7106-201ENST00000612419 65 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AC016911.1-201ENST00000613297 452 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 MIR6076-201ENST00000617521 113 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AC018926.3-201ENST00000618841 406 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AL360181.4-201ENST00000621752 134 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AC095031.1-201ENST00000623685 672 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AC090617.9-201ENST00000623751 147 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AL356118.1-201ENST00000635272 1078 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 ZNF90P1-201ENST00000480493 1951 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AC090740.1-201ENST00000623193 2262 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 RNA5SP258-201ENST00000362750 119 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 RPL21P75-201ENST00000396599 483 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AL512633.1-201ENST00000399931 655 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 TAF9BP2-201ENST00000400856 499 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 RPL21P28-201ENST00000401418 483 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 SSXP10-201ENST00000402595 565 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AL592114.1-201ENST00000403842 483 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 NDUFB4P4-201ENST00000404822 243 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 RNU4-78P-201ENST00000410940 126 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 SSXP9-201ENST00000417503 292 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 RPS6P14-201ENST00000425165 719 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AL590623.1-201ENST00000427864 105 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 RPL21P2-201ENST00000440049 481 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AL831737.1-201ENST00000441288 271 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC025750.2-201ENST00000442609 450 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 RAB11AP1-201ENST00000442978 646 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC112653.1-201ENST00000443851 386 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 RSL24D1P2-201ENST00000445584 366 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC008280.2-201ENST00000455473 307 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 RPL21P39-201ENST00000463605 483 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC003982.1-202ENST00000469928 248 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC011979.1-201ENST00000472300 483 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC015724.1-201ENST00000478577 156 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 RPL21P93-201ENST00000480465 489 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC233702.1-201ENST00000482905 502 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC087190.1-201ENST00000484462 480 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC093591.1-201ENST00000491435 481 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 OR9N1P-202ENST00000494289 481 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 RPL21P16-201ENST00000495531 483 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 DSTNP2-201ENST00000504533 515 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 RNU6-202P-201ENST00000515998 96 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC083923.1-201ENST00000523708 376 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 HSPE1P20-201ENST00000538133 289 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC092470.1-201ENST00000546187 132 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC087481.2-201ENST00000565492 330 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC006504.3-201ENST00000586818 523 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 ELOCP29-201ENST00000588193 334 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC128687.1-201ENST00000605304 619 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AL355810.1-201ENST00000614629 552 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC008083.4-201ENST00000615076 444 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AL138880.2-201ENST00000616214 239 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AL355493.4-201ENST00000618530 292 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC007275.1-201ENST00000621243 671 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 SGO1P2-201ENST00000429458 1589 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 AC046144.1-201ENST00000478559 1853 ntBASIC2.18□□□□□ -2.06
TRAV41A0A0B4J266 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 AL161431.1-201ENST00000618966 4205 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms