Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RNA5SP82-201ENST00000516707 92 ntBASIC1.88□□□□□ -2.11
SSSCA1O60232 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.88□□□□□ -2.11
SSSCA1O60232 AC025281.1-201ENST00000567026 265 ntBASIC1.88□□□□□ -2.11
SSSCA1O60232 AC007336.1-201ENST00000576365 3828 ntBASIC1.88□□□□□ -2.11
SSSCA1O60232 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC1.88□□□□□ -2.11
SSSCA1O60232 MIR4325-201ENST00000583049 90 ntBASIC1.88□□□□□ -2.11
SSSCA1O60232 AC245036.5-201ENST00000596330 847 ntBASIC1.88□□□□□ -2.11
SSSCA1O60232 AL392112.1-201ENST00000605115 829 ntBASIC1.88□□□□□ -2.11
SSSCA1O60232 AC012213.4-201ENST00000606457 354 ntBASIC1.88□□□□□ -2.11
SSSCA1O60232 AL159169.3-201ENST00000608871 561 ntBASIC1.88□□□□□ -2.11
SSSCA1O60232 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC1.88□□□□□ -2.11
SSSCA1O60232 RPL23AP61-201ENST00000623642 466 ntBASIC1.88□□□□□ -2.11
SSSCA1O60232 AC092608.2-201ENST00000624427 218 ntBASIC1.88□□□□□ -2.11
SSSCA1O60232 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC1.88□□□□□ -2.11
SSSCA1O60232 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
SSSCA1O60232 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
SSSCA1O60232 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SSSCA1O60232 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SSSCA1O60232 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SSSCA1O60232 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SSSCA1O60232 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SSSCA1O60232 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SSSCA1O60232 MORF4L1P6-201ENST00000418771 268 ntBASIC1.87□□□□□ -2.11
SSSCA1O60232 AL606495.1-201ENST00000422100 813 ntBASIC1.87□□□□□ -2.11
SSSCA1O60232 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.87□□□□□ -2.11
SSSCA1O60232 RPS15AP28-201ENST00000435088 386 ntBASIC1.87□□□□□ -2.11
SSSCA1O60232 SNORD109B-201ENST00000458961 67 ntBASIC1.87□□□□□ -2.11
SSSCA1O60232 SNORD109A-201ENST00000459128 67 ntBASIC1.87□□□□□ -2.11
SSSCA1O60232 AC104435.1-201ENST00000483483 166 ntBASIC1.87□□□□□ -2.11
SSSCA1O60232 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC1.87□□□□□ -2.11
SSSCA1O60232 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.87□□□□□ -2.11
SSSCA1O60232 AC026436.1-201ENST00000510537 270 ntBASIC1.87□□□□□ -2.11
SSSCA1O60232 COX6CP8-201ENST00000522620 226 ntBASIC1.87□□□□□ -2.11
SSSCA1O60232 CASP1-216ENST00000534497 825 ntTSL 5 BASIC1.87□□□□□ -2.11
SSSCA1O60232 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.87□□□□□ -2.11
SSSCA1O60232 AP003717.3-201ENST00000544832 1180 ntBASIC1.87□□□□□ -2.11
SSSCA1O60232 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.87□□□□□ -2.11
SSSCA1O60232 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC1.87□□□□□ -2.11
SSSCA1O60232 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.87□□□□□ -2.11
SSSCA1O60232 COX6CP3-201ENST00000580869 223 ntBASIC1.87□□□□□ -2.11
SSSCA1O60232 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.87□□□□□ -2.11
SSSCA1O60232 AL161756.2-201ENST00000604597 246 ntBASIC1.87□□□□□ -2.11
SSSCA1O60232 AC006329.2-201ENST00000611491 394 ntBASIC1.87□□□□□ -2.11
SSSCA1O60232 AC245517.5-201ENST00000611529 162 ntBASIC1.87□□□□□ -2.11
SSSCA1O60232 NF1P10-201ENST00000613227 742 ntBASIC1.87□□□□□ -2.11
SSSCA1O60232 AC011472.4-201ENST00000615848 491 ntBASIC1.87□□□□□ -2.11
SSSCA1O60232 AC020763.5-201ENST00000623298 430 ntBASIC1.87□□□□□ -2.11
SSSCA1O60232 MIR1291-201ENST00000627649 87 ntBASIC1.87□□□□□ -2.11
SSSCA1O60232 AC099654.7-201ENST00000635788 2127 ntBASIC1.87□□□□□ -2.11
SSSCA1O60232 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.86□□□□□ -2.11
SSSCA1O60232 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SSSCA1O60232 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.86□□□□□ -2.11
SSSCA1O60232 RNU6-666P-201ENST00000363499 107 ntBASIC1.86□□□□□ -2.11
SSSCA1O60232 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.86□□□□□ -2.11
SSSCA1O60232 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SSSCA1O60232 AL359511.1-201ENST00000402970 211 ntBASIC1.86□□□□□ -2.11
SSSCA1O60232 AC007064.1-201ENST00000412238 351 ntBASIC1.86□□□□□ -2.11
SSSCA1O60232 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC1.86□□□□□ -2.11
SSSCA1O60232 AC091390.3-201ENST00000426478 338 ntBASIC1.86□□□□□ -2.11
SSSCA1O60232 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.86□□□□□ -2.11
SSSCA1O60232 NPM1P13-201ENST00000452663 865 ntBASIC1.86□□□□□ -2.11
SSSCA1O60232 GZMAP1-201ENST00000503054 631 ntBASIC1.86□□□□□ -2.11
SSSCA1O60232 RNA5SP471-201ENST00000516971 106 ntBASIC1.86□□□□□ -2.11
SSSCA1O60232 ERHP1-201ENST00000523006 310 ntBASIC1.86□□□□□ -2.11
SSSCA1O60232 SUB1P1-201ENST00000524415 382 ntBASIC1.86□□□□□ -2.11
SSSCA1O60232 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SSSCA1O60232 AP000790.1-201ENST00000528891 737 ntBASIC1.86□□□□□ -2.11
SSSCA1O60232 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.86□□□□□ -2.11
SSSCA1O60232 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.86□□□□□ -2.11
SSSCA1O60232 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC1.86□□□□□ -2.11
SSSCA1O60232 ISCA1P3-201ENST00000577104 373 ntBASIC1.86□□□□□ -2.11
SSSCA1O60232 AC103810.1-201ENST00000579873 453 ntBASIC1.86□□□□□ -2.11
SSSCA1O60232 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
SSSCA1O60232 SRGNP1-201ENST00000603392 451 ntBASIC1.86□□□□□ -2.11
SSSCA1O60232 RMST_5.1-201ENST00000618704 126 ntBASIC1.86□□□□□ -2.11
SSSCA1O60232 AL731566.2-201ENST00000618971 317 ntBASIC1.86□□□□□ -2.11
SSSCA1O60232 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.86□□□□□ -2.11
SSSCA1O60232 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC1.86□□□□□ -2.11
SSSCA1O60232 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SSSCA1O60232 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
SSSCA1O60232 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.86□□□□□ -2.11
SSSCA1O60232 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SSSCA1O60232 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
SSSCA1O60232 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SSSCA1O60232 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
SSSCA1O60232 AL359693.1-201ENST00000614959 2407 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 AL591416.1-201ENST00000404015 867 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.85□□□□□ -2.11
SSSCA1O60232 UBE2D3P2-201ENST00000424409 445 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 RPL7P37-201ENST00000425095 738 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 MORF4L1P7-201ENST00000426038 703 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 AC092427.1-202ENST00000430569 476 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 UBE2V1P6-201ENST00000430840 422 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 MTCYBP29-201ENST00000436327 1006 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC1.85□□□□□ -2.11
SSSCA1O60232 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.85□□□□□ -2.11
SSSCA1O60232 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.85□□□□□ -2.11
SSSCA1O60232 DPPA3P1-201ENST00000448050 469 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 AC104978.1-201ENST00000449387 391 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 RPS24P6-201ENST00000452670 400 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms