Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC004062.1-201ENST00000509926 645 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 DUXAP2-201ENST00000519198 589 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AC007991.1-201ENST00000522680 631 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AC090877.1-201ENST00000561418 344 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 MIR5187-201ENST00000583479 76 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 BBIP1P1-201ENST00000602999 279 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AC112220.3-201ENST00000605502 502 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AL390208.1-201ENST00000605885 644 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AC019176.2-201ENST00000611579 315 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AC140725.3-201ENST00000616193 880 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AC084757.4-201ENST00000616350 526 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AL136981.2-201ENST00000617319 734 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AP000676.4-201ENST00000624659 623 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AC004925.1-201ENST00000624256 2706 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AL161912.2-201ENST00000565707 3007 ntBASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA3F8WFD2 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NPIPA3F8WFD2 MTND4P34-201ENST00000572715 1371 ntBASIC3.4□□□□□ -1.86
NPIPA3F8WFD2 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NPIPA3F8WFD2 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NPIPA3F8WFD2 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 MIR208A-201ENST00000362287 71 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 RNU6-28P-201ENST00000362378 107 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 SNORD113-6-201ENST00000363345 75 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 MTCO2P5-201ENST00000422621 426 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 HSPD1P21-201ENST00000436541 245 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 MUPP-201ENST00000438111 566 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 MTCYBP31-201ENST00000438855 1122 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 RPL7P52-201ENST00000449200 742 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 PDSS1P2-201ENST00000449397 678 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 HMGB1P15-201ENST00000453854 435 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 ST13P14-201ENST00000474095 734 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 RPL31P13-201ENST00000484151 370 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 AC006499.5-201ENST00000505037 514 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 AC004069.2-201ENST00000505438 1114 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 RN7SKP18-201ENST00000516005 275 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 AC105185.1-201ENST00000518705 535 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 IGKV2D-19-201ENST00000523346 262 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 AC012182.1-201ENST00000570133 895 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 AC006539.2-201ENST00000601729 572 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 AL137849.1-201ENST00000604767 169 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 AL607023.1-201ENST00000620045 248 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 OR4G11P-202ENST00000642116 1414 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 USP8P1-201ENST00000494673 3183 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 ZNF542P-204ENST00000482727 1305 ntBASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.4□□□□□ -1.87
NPIPA3F8WFD2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 GABPAP-201ENST00000419271 1356 ntBASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 OR5H2-201ENST00000355273 945 ntBASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 SNORA51.2-201ENST00000364595 132 ntBASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 Y_RNA.333-201ENST00000365274 102 ntBASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 SYF2P2-201ENST00000417620 583 ntBASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 AC068533.1-201ENST00000418542 415 ntBASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 SDCBPP1-201ENST00000440192 890 ntBASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 RSL24D1P3-201ENST00000449255 495 ntBASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 RPS24P6-201ENST00000452670 400 ntBASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 PRSS3P4-201ENST00000453323 162 ntBASIC3.39□□□□□ -1.87
NPIPA3F8WFD2 AL136097.1-201ENST00000456945 913 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms