Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC092435.3-201ENST00000565538 3654 ntBASIC1.76□□□□□ -2.13
COL6A5A8TX70 RNU1-75P-201ENST00000347264 129 ntBASIC1.76□□□□□ -2.13
COL6A5A8TX70 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
COL6A5A8TX70 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
COL6A5A8TX70 AL358075.3-201ENST00000426289 226 ntBASIC1.76□□□□□ -2.13
COL6A5A8TX70 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.76□□□□□ -2.13
COL6A5A8TX70 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.76□□□□□ -2.13
COL6A5A8TX70 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
COL6A5A8TX70 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.76□□□□□ -2.13
COL6A5A8TX70 AC004825.2-201ENST00000616634 455 ntBASIC1.76□□□□□ -2.13
COL6A5A8TX70 MTND5P28-201ENST00000438005 1594 ntBASIC1.76□□□□□ -2.13
COL6A5A8TX70 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC1.76□□□□□ -2.13
COL6A5A8TX70 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
COL6A5A8TX70 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
COL6A5A8TX70 MIR598-201ENST00000384868 97 ntBASIC1.76□□□□□ -2.13
COL6A5A8TX70 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
COL6A5A8TX70 IGLV3-17-201ENST00000519099 244 ntBASIC1.76□□□□□ -2.13
COL6A5A8TX70 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.76□□□□□ -2.13
COL6A5A8TX70 VN1R80P-201ENST00000597126 338 ntBASIC1.76□□□□□ -2.13
COL6A5A8TX70 AL139286.1-201ENST00000604465 483 ntBASIC1.76□□□□□ -2.13
COL6A5A8TX70 AC245517.5-201ENST00000611529 162 ntBASIC1.76□□□□□ -2.13
COL6A5A8TX70 MIR6895-201ENST00000613497 78 ntBASIC1.76□□□□□ -2.13
COL6A5A8TX70 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC1.76□□□□□ -2.13
COL6A5A8TX70 AC103988.1-201ENST00000566382 2177 ntBASIC1.76□□□□□ -2.13
COL6A5A8TX70 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
COL6A5A8TX70 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
COL6A5A8TX70 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
COL6A5A8TX70 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
COL6A5A8TX70 WWP1P1-201ENST00000466609 2769 ntBASIC1.75□□□□□ -2.13
COL6A5A8TX70 RNU6-115P-201ENST00000364310 107 ntBASIC1.75□□□□□ -2.13
COL6A5A8TX70 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.75□□□□□ -2.13
COL6A5A8TX70 RNU6-356P-201ENST00000384140 107 ntBASIC1.75□□□□□ -2.13
COL6A5A8TX70 AC019129.1-201ENST00000403786 261 ntBASIC1.75□□□□□ -2.13
COL6A5A8TX70 AC090543.1-201ENST00000492168 485 ntBASIC1.75□□□□□ -2.13
COL6A5A8TX70 AC011604.1-201ENST00000545978 196 ntBASIC1.75□□□□□ -2.13
COL6A5A8TX70 AC234775.3-201ENST00000564612 656 ntBASIC1.75□□□□□ -2.13
COL6A5A8TX70 PVT1_3.1-201ENST00000620853 95 ntBASIC1.75□□□□□ -2.13
COL6A5A8TX70 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
COL6A5A8TX70 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
COL6A5A8TX70 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.75□□□□□ -2.13
COL6A5A8TX70 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
COL6A5A8TX70 U8.10-201ENST00000384260 133 ntBASIC1.75□□□□□ -2.13
COL6A5A8TX70 RPL21P3-201ENST00000395517 478 ntBASIC1.75□□□□□ -2.13
COL6A5A8TX70 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.75□□□□□ -2.13
COL6A5A8TX70 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
COL6A5A8TX70 RPS15AP12-201ENST00000419498 388 ntBASIC1.75□□□□□ -2.13
COL6A5A8TX70 IPMKP1-201ENST00000425988 855 ntBASIC1.75□□□□□ -2.13
COL6A5A8TX70 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.75□□□□□ -2.13
COL6A5A8TX70 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
COL6A5A8TX70 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.75□□□□□ -2.13
COL6A5A8TX70 Z73417.1-201ENST00000447373 778 ntBASIC1.75□□□□□ -2.13
COL6A5A8TX70 AC140059.1-201ENST00000489238 361 ntBASIC1.75□□□□□ -2.13
COL6A5A8TX70 RPS26P24-201ENST00000497656 331 ntBASIC1.75□□□□□ -2.13
COL6A5A8TX70 AC021146.1-201ENST00000511202 716 ntBASIC1.75□□□□□ -2.13
COL6A5A8TX70 AP002748.2-201ENST00000528671 348 ntBASIC1.75□□□□□ -2.13
COL6A5A8TX70 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.75□□□□□ -2.13
COL6A5A8TX70 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.75□□□□□ -2.13
COL6A5A8TX70 AC010872.1-201ENST00000624225 675 ntBASIC1.75□□□□□ -2.13
COL6A5A8TX70 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC1.75□□□□□ -2.13
COL6A5A8TX70 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
COL6A5A8TX70 AC000367.1-201ENST00000452711 1766 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 RPL31P1-201ENST00000398116 372 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.74□□□□□ -2.13
COL6A5A8TX70 AC098826.1-201ENST00000433943 471 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.74□□□□□ -2.13
COL6A5A8TX70 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.74□□□□□ -2.13
COL6A5A8TX70 AC010546.1-201ENST00000569391 485 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.74□□□□□ -2.13
COL6A5A8TX70 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1.74□□□□□ -2.13
COL6A5A8TX70 AC022709.1-201ENST00000615967 87 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 MIR1291-201ENST00000627649 87 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
COL6A5A8TX70 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
COL6A5A8TX70 MTND5P19-201ENST00000424872 1794 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 AL355596.1-201ENST00000565399 3996 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
COL6A5A8TX70 SNORA67.5-201ENST00000391036 107 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 AL512633.1-201ENST00000399931 655 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC1.74□□□□□ -2.13
COL6A5A8TX70 AC009237.2-201ENST00000421358 284 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 NDUFB4P6-201ENST00000436819 366 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 AC245517.2-201ENST00000442890 346 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 RPL21P41-201ENST00000459863 264 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.74□□□□□ -2.13
COL6A5A8TX70 LRRC37A5P-203ENST00000580181 585 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 MIR5007-201ENST00000583098 95 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 AC087468.1-201ENST00000604365 630 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 BX248123.2-201ENST00000606318 124 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 AC074140.1-201ENST00000621617 208 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 AC091152.2-201ENST00000591628 2569 ntBASIC1.74□□□□□ -2.13
COL6A5A8TX70 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL6A5A8TX70 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
COL6A5A8TX70 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
COL6A5A8TX70 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
COL6A5A8TX70 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL6A5A8TX70 AL450326.2-201ENST00000421913 1962 ntBASIC1.73□□□□□ -2.13
COL6A5A8TX70 CACYBPP1-201ENST00000438592 684 ntBASIC1.73□□□□□ -2.13
COL6A5A8TX70 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.73□□□□□ -2.13
COL6A5A8TX70 AC092155.2-201ENST00000454675 477 ntBASIC1.73□□□□□ -2.13
COL6A5A8TX70 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms