Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 NDUFB4P2-201ENST00000509515 391 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 KCTD9P2-201ENST00000512203 1013 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 AC093677.1-201ENST00000514414 678 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 MIR2114-201ENST00000516645 80 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS50Q96JG6 AC024224.1-201ENST00000538284 609 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 ZNF519P3-201ENST00000557158 1032 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS50Q96JG6 AC136624.4-201ENST00000573044 370 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS50Q96JG6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS50Q96JG6 AC090948.1-201ENST00000607464 549 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 AC091965.4-201ENST00000607691 587 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 uc_338.32-201ENST00000615087 172 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 C2orf27A-204ENST00000623058 969 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 AC095031.1-201ENST00000623685 672 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS50Q96JG6 AP002001.2-201ENST00000529025 1469 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS50Q96JG6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS50Q96JG6 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS50Q96JG6 AC139713.2-214ENST00000642059 1811 ntBASIC4.28□□□□□ -1.72
VPS50Q96JG6 RAD17P1-201ENST00000418130 2042 ntBASIC4.28□□□□□ -1.73
VPS50Q96JG6 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS50Q96JG6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS50Q96JG6 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS50Q96JG6 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS50Q96JG6 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS50Q96JG6 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 AC007685.1-201ENST00000329806 452 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 RNU6-259P-201ENST00000383999 107 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 MIR153-1-201ENST00000384914 90 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 AL049693.1-201ENST00000402760 611 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 Y_RNA.608-201ENST00000410647 95 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 AC007742.1-201ENST00000425789 329 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 ELOCP26-201ENST00000436067 329 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 AC091862.1-201ENST00000438016 1100 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 RPL23AP24-201ENST00000458203 385 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 AC108064.1-201ENST00000513791 460 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 Vault.1-201ENST00000516474 102 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 IGKV2D-36-201ENST00000518643 226 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 AC073091.2-201ENST00000603205 907 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 AP002360.3-201ENST00000607673 710 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 AC023043.4-201ENST00000612081 449 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 MIR6810-201ENST00000622701 70 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 AC099654.13-201ENST00000639774 207 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS50Q96JG6 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS50Q96JG6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS50Q96JG6 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS50Q96JG6 SAGE4P-201ENST00000442271 3381 ntBASIC4.27□□□□□ -1.73
VPS50Q96JG6 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS50Q96JG6 MARK2P15-201ENST00000432204 2186 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS50Q96JG6 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS50Q96JG6 RNU1-15P-201ENST00000353977 144 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 RPL32P3-201ENST00000359025 275 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 RN7SKP227-201ENST00000364445 330 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 RNU6-730P-201ENST00000383954 104 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 RNU6-1042P-201ENST00000384204 107 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 RPS3AP36-201ENST00000398190 775 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 RPS20P2-201ENST00000402520 389 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS50Q96JG6 AC127526.1-201ENST00000417526 366 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 Z97055.1-201ENST00000419730 712 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 MTCO2P5-201ENST00000422621 426 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS50Q96JG6 AL732292.1-201ENST00000426692 226 ntBASIC4.26□□□□□ -1.73
VPS50Q96JG6 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms