Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNA5SP341-201ENST00000516261 117 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 SNORA31.11-201ENST00000516528 139 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AL355836.1-201ENST00000555951 870 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AC012493.2-201ENST00000595083 291 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AC024220.1-201ENST00000603675 484 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AL160237.3-201ENST00000604114 1013 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AL161756.2-201ENST00000604597 246 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AL009028.1-201ENST00000604895 802 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AC092650.2-201ENST00000619984 902 ntBASIC2.11□□□□□ -2.07
HIST1H1AQ02539 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.11□□□□□ -2.07
HIST1H1AQ02539 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HIST1H1AQ02539 AC009501.3-201ENST00000605001 1352 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 AC092593.1-201ENST00000515413 1815 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 AC011460.1-201ENST00000636268 1834 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 SNORA67.1-201ENST00000364749 141 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.1□□□□□ -2.07
HIST1H1AQ02539 SNORA1.3-201ENST00000384676 136 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 RNA5SP171-201ENST00000391071 115 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 RPS4XP3-201ENST00000398541 413 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 RPS4XP7-201ENST00000406274 780 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 FAT1P1-201ENST00000406588 507 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.1□□□□□ -2.07
HIST1H1AQ02539 RNA5SP181-201ENST00000410246 98 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.1□□□□□ -2.07
HIST1H1AQ02539 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.1□□□□□ -2.07
HIST1H1AQ02539 MTCO3P12-201ENST00000416718 547 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 AL606490.7-201ENST00000433136 191 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 MRPL50P4-201ENST00000446432 475 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 AP001992.1-205ENST00000462248 379 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 AC003982.1-202ENST00000469928 248 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.1□□□□□ -2.07
HIST1H1AQ02539 NAMPTP2-201ENST00000505629 1115 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.1□□□□□ -2.07
HIST1H1AQ02539 AC117522.3-201ENST00000507974 584 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.1□□□□□ -2.07
HIST1H1AQ02539 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HIST1H1AQ02539 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HIST1H1AQ02539 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.1□□□□□ -2.07
HIST1H1AQ02539 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.1□□□□□ -2.07
HIST1H1AQ02539 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.1□□□□□ -2.07
HIST1H1AQ02539 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.1□□□□□ -2.07
HIST1H1AQ02539 AC079880.2-201ENST00000603790 1213 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 YPEL5P2-201ENST00000605553 359 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 BX664608.1-201ENST00000610519 487 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.1□□□□□ -2.07
HIST1H1AQ02539 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.1□□□□□ -2.07
HIST1H1AQ02539 AC095031.1-201ENST00000623685 672 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HIST1H1AQ02539 AL359893.1-201ENST00000447628 1580 ntBASIC2.1□□□□□ -2.07
HIST1H1AQ02539 AL359693.1-201ENST00000614959 2407 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 MIR144-201ENST00000384886 86 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 TAS2R15P-201ENST00000390674 928 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.09□□□□□ -2.07
HIST1H1AQ02539 AL513175.2-201ENST00000422071 443 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 AL389915.1-201ENST00000422463 466 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.09□□□□□ -2.07
HIST1H1AQ02539 RPS15AP7-201ENST00000439294 405 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.09□□□□□ -2.07
HIST1H1AQ02539 AL034418.1-201ENST00000448675 860 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 AC113398.2-201ENST00000507630 558 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 AC091826.1-201ENST00000514065 313 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 RNA5SP82-201ENST00000516707 92 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 RNA5SP402-201ENST00000517148 110 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.09□□□□□ -2.07
HIST1H1AQ02539 MTCO1P47-201ENST00000523889 1271 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.09□□□□□ -2.07
HIST1H1AQ02539 AL133271.1-201ENST00000538229 291 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 AC022080.3-201ENST00000544433 482 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 NOP56P3-201ENST00000549457 385 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.09□□□□□ -2.07
HIST1H1AQ02539 ACTR3BP3-201ENST00000565577 979 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 MYL12BP1-201ENST00000569826 507 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 AC053481.3-201ENST00000577881 843 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 AC008277.2-201ENST00000605196 797 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.09□□□□□ -2.07
HIST1H1AQ02539 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.09□□□□□ -2.07
HIST1H1AQ02539 AC245517.5-201ENST00000611529 162 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 CR381653.2-201ENST00000624041 768 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 AC004777.1-201ENST00000624317 287 ntBASIC2.09□□□□□ -2.07
HIST1H1AQ02539 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.09□□□□□ -2.07
HIST1H1AQ02539 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.08
HIST1H1AQ02539 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.08
HIST1H1AQ02539 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 RNU4-31P-201ENST00000384211 141 ntBASIC2.08□□□□□ -2.08
HIST1H1AQ02539 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 AJ239321.1-201ENST00000424255 564 ntBASIC2.08□□□□□ -2.08
HIST1H1AQ02539 RPL35AP12-201ENST00000425362 338 ntBASIC2.08□□□□□ -2.08
HIST1H1AQ02539 AL392003.1-201ENST00000434394 243 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms