Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AC234772.3-201ENST00000602277 528 ntBASIC3.57□□□□□ -1.84
TRIM49BA6NDI0 AL020997.3-201ENST00000602843 359 ntBASIC3.57□□□□□ -1.84
TRIM49BA6NDI0 AC093424.1-201ENST00000604999 338 ntBASIC3.57□□□□□ -1.84
TRIM49BA6NDI0 AC009237.15-201ENST00000610252 501 ntBASIC3.57□□□□□ -1.84
TRIM49BA6NDI0 AC090116.1-201ENST00000615679 446 ntBASIC3.57□□□□□ -1.84
TRIM49BA6NDI0 AL355365.1-201ENST00000616480 294 ntBASIC3.57□□□□□ -1.84
TRIM49BA6NDI0 AC092184.1-201ENST00000625042 715 ntBASIC3.57□□□□□ -1.84
TRIM49BA6NDI0 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM49BA6NDI0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
TRIM49BA6NDI0 AC004925.1-201ENST00000624256 2706 ntBASIC3.57□□□□□ -1.84
TRIM49BA6NDI0 AL672296.1-201ENST00000427780 2158 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AL021368.2-201ENST00000606125 5352 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 MTND5P24-201ENST00000438892 1767 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 RNA5SP295-201ENST00000362655 121 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 RNU6-629P-201ENST00000384061 103 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 RNU6-761P-201ENST00000384148 107 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 PTMAP5-201ENST00000393073 333 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 ANAPC10P1-201ENST00000395991 556 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 RPL7P27-201ENST00000403775 720 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AL583834.1-201ENST00000406943 343 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 KRR1P1-201ENST00000419430 803 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 RPS15AP6-201ENST00000420703 385 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 RPL23AP22-201ENST00000437556 453 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AL592437.1-201ENST00000443781 492 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AL358794.1-201ENST00000445689 381 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AL050341.1-201ENST00000447743 313 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AC125238.1-201ENST00000448842 249 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 NPM1P13-201ENST00000452663 865 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 snoU13.24-201ENST00000458998 104 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 OR5H5P-201ENST00000503164 928 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AC118282.1-201ENST00000506408 765 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 HMGB3P15-201ENST00000507326 574 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AC008837.1-201ENST00000511513 412 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 RN7SKP287-201ENST00000516546 266 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 RN7SKP289-201ENST00000517244 295 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 SYF2P1-201ENST00000550658 413 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 MIR3944-201ENST00000581277 108 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AC100793.4-201ENST00000613683 429 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AL355493.4-201ENST00000618530 292 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AC123767.1-202ENST00000620407 817 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AC068787.1-201ENST00000623908 691 ntBASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM49BA6NDI0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 RNA5SP50-201ENST00000363731 107 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 RNU6-619P-201ENST00000365146 108 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 RNU6-549P-201ENST00000384433 107 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 MIR7-3-201ENST00000384898 110 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 GSTA8P-201ENST00000404253 637 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 RPS7P9-201ENST00000414704 586 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AC007390.1-201ENST00000415722 356 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 MTCO3P12-201ENST00000416718 547 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AC005005.2-201ENST00000420779 380 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AC009237.2-201ENST00000421358 284 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AC006548.1-201ENST00000427470 102 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 RPL7P52-201ENST00000449200 742 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 MTND1P31-201ENST00000449206 961 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 RPS24P6-201ENST00000452670 400 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 NDUFA5P7-201ENST00000452914 242 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 HMGN2P16-201ENST00000456802 261 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 RPS4XP10-201ENST00000465034 731 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AC010285.1-201ENST00000470580 392 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AL024509.2-201ENST00000493462 493 ntBASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM49BA6NDI0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms