Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5538W4VSP6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5538W4VSP6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5538W4VSP6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5538W4VSP6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Gm5538W4VSP6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Gm5538W4VSP6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5538W4VSP6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5538W4VSP6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5538W4VSP6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5538W4VSP6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Gm9013-201ENSMUST00000132939 882 ntBASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Gm36967-201ENSMUST00000193814 266 ntBASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Gm5538W4VSP6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Gm5538W4VSP6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Gm5538W4VSP6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Gm6623-201ENSMUST00000173570 544 ntBASIC16.69■□□□□ 0.26
Gm5538W4VSP6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Gm17808-201ENSMUST00000200859 894 ntBASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5538W4VSP6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms