Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
H2afb2S4R1M3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.39■□□□□ 0.22
H2afb2S4R1M3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
H2afb2S4R1M3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
H2afb2S4R1M3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb2S4R1M3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb2S4R1M3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb2S4R1M3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb2S4R1M3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb2S4R1M3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.39■□□□□ 0.21
H2afb2S4R1M3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
H2afb2S4R1M3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb2S4R1M3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb2S4R1M3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
H2afb2S4R1M3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.39■□□□□ 0.21
H2afb2S4R1M3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
H2afb2S4R1M3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
H2afb2S4R1M3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
H2afb2S4R1M3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb2S4R1M3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb2S4R1M3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb2S4R1M3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.39■□□□□ 0.21
H2afb2S4R1M3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb2S4R1M3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
H2afb2S4R1M3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Gm18032-201ENSMUST00000222541 538 ntBASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
H2afb2S4R1M3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb2S4R1M3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb2S4R1M3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
H2afb2S4R1M3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb2S4R1M3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb2S4R1M3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.37■□□□□ 0.21
H2afb2S4R1M3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
H2afb2S4R1M3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb2S4R1M3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
H2afb2S4R1M3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
H2afb2S4R1M3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb2S4R1M3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.37■□□□□ 0.21
H2afb2S4R1M3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb2S4R1M3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb2S4R1M3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb2S4R1M3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb2S4R1M3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb2S4R1M3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Gm11355-201ENSMUST00000121120 306 ntBASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Gm37722-201ENSMUST00000193757 208 ntBASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms