Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Smarcb1Q9Z0H3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcb1Q9Z0H3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Gm9172-201ENSMUST00000212092 954 ntBASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcb1Q9Z0H3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Gm11452-201ENSMUST00000122376 690 ntBASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Gm44771-201ENSMUST00000206975 626 ntBASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Gm6376-201ENSMUST00000209407 580 ntBASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.91■□□□□ 0.3
Smarcb1Q9Z0H3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 Gm12497-201ENSMUST00000138778 237 ntBASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcb1Q9Z0H3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms