Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col13a1Q9R1N9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col13a1Q9R1N9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Col13a1Q9R1N9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Gm14822-201ENSMUST00000122247 291 ntBASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Gm2756-201ENSMUST00000195851 400 ntBASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col13a1Q9R1N9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Col13a1Q9R1N9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col13a1Q9R1N9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms