Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn5aQ9JJV9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Scn5aQ9JJV9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Scn5aQ9JJV9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Scn5aQ9JJV9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn5aQ9JJV9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn5aQ9JJV9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn5aQ9JJV9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn5aQ9JJV9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.83■□□□□ 0.28
Scn5aQ9JJV9 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.83■□□□□ 0.28
Scn5aQ9JJV9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn5aQ9JJV9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.83■□□□□ 0.28
Scn5aQ9JJV9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn5aQ9JJV9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Scn5aQ9JJV9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn5aQ9JJV9 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.83■□□□□ 0.28
Scn5aQ9JJV9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn5aQ9JJV9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn5aQ9JJV9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms