Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Zc3h8Q9JJ48 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zc3h8Q9JJ48 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.18■□□□□ 0.02
Zc3h8Q9JJ48 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zc3h8Q9JJ48 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Zc3h8Q9JJ48 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zc3h8Q9JJ48 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Zc3h8Q9JJ48 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.18■□□□□ 0.02
Zc3h8Q9JJ48 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Zc3h8Q9JJ48 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zc3h8Q9JJ48 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zc3h8Q9JJ48 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zc3h8Q9JJ48 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zc3h8Q9JJ48 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zc3h8Q9JJ48 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Zc3h8Q9JJ48 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Zc3h8Q9JJ48 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3h8Q9JJ48 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3h8Q9JJ48 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3h8Q9JJ48 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3h8Q9JJ48 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3h8Q9JJ48 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3h8Q9JJ48 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3h8Q9JJ48 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3h8Q9JJ48 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.16■□□□□ 0.02
Zc3h8Q9JJ48 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.16■□□□□ 0.02
Zc3h8Q9JJ48 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.16■□□□□ 0.02
Zc3h8Q9JJ48 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Zc3h8Q9JJ48 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3h8Q9JJ48 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3h8Q9JJ48 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3h8Q9JJ48 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.16■□□□□ 0.02
Zc3h8Q9JJ48 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3h8Q9JJ48 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3h8Q9JJ48 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3h8Q9JJ48 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3h8Q9JJ48 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Zc3h8Q9JJ48 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3h8Q9JJ48 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3h8Q9JJ48 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3h8Q9JJ48 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3h8Q9JJ48 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3h8Q9JJ48 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3h8Q9JJ48 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Zc3h8Q9JJ48 Gm13312-201ENSMUST00000119631 718 ntBASIC15.15■□□□□ 0.02
Zc3h8Q9JJ48 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3h8Q9JJ48 Gm36967-201ENSMUST00000193814 266 ntBASIC15.15■□□□□ 0.02
Zc3h8Q9JJ48 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3h8Q9JJ48 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3h8Q9JJ48 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3h8Q9JJ48 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Zc3h8Q9JJ48 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Gm13216-201ENSMUST00000117145 591 ntBASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3h8Q9JJ48 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Zc3h8Q9JJ48 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zc3h8Q9JJ48 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Zc3h8Q9JJ48 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zc3h8Q9JJ48 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zc3h8Q9JJ48 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms