Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Gm10653-202ENSMUST00000139570 835 ntBASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rbfox1Q9JJ43 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.94□□□□□ -0.18
Rbfox1Q9JJ43 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rbfox1Q9JJ43 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rbfox1Q9JJ43 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.94□□□□□ -0.18
Rbfox1Q9JJ43 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rbfox1Q9JJ43 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.94□□□□□ -0.18
Rbfox1Q9JJ43 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Rbfox1Q9JJ43 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.94□□□□□ -0.18
Rbfox1Q9JJ43 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rbfox1Q9JJ43 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rbfox1Q9JJ43 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rbfox1Q9JJ43 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rbfox1Q9JJ43 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rbfox1Q9JJ43 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rbfox1Q9JJ43 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rbfox1Q9JJ43 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rbfox1Q9JJ43 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rbfox1Q9JJ43 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.94□□□□□ -0.18
Rbfox1Q9JJ43 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.93□□□□□ -0.18
Rbfox1Q9JJ43 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Gm11539-201ENSMUST00000119837 557 ntBASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms