Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Smco4Q9JIS3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Gm11421-201ENSMUST00000122124 294 ntBASIC13.22□□□□□ -0.29
Smco4Q9JIS3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Spcs1-204ENSMUST00000226782 949 ntBASIC13.22□□□□□ -0.29
Smco4Q9JIS3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smco4Q9JIS3 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.21□□□□□ -0.29
Smco4Q9JIS3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
Smco4Q9JIS3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smco4Q9JIS3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smco4Q9JIS3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Smco4Q9JIS3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Smco4Q9JIS3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.21□□□□□ -0.29
Smco4Q9JIS3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Smco4Q9JIS3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Smco4Q9JIS3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.21□□□□□ -0.29
Smco4Q9JIS3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smco4Q9JIS3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.21□□□□□ -0.29
Smco4Q9JIS3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smco4Q9JIS3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smco4Q9JIS3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smco4Q9JIS3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smco4Q9JIS3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Smco4Q9JIS3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smco4Q9JIS3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smco4Q9JIS3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smco4Q9JIS3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smco4Q9JIS3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smco4Q9JIS3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smco4Q9JIS3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Smco4Q9JIS3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smco4Q9JIS3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smco4Q9JIS3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smco4Q9JIS3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms