Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1cQ9ES64 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1cQ9ES64 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ush1cQ9ES64 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1cQ9ES64 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ush1cQ9ES64 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ush1cQ9ES64 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1cQ9ES64 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1cQ9ES64 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1cQ9ES64 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Ush1cQ9ES64 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1cQ9ES64 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Flg-201ENSMUST00000050758 1488 ntBASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Gm44549-201ENSMUST00000208351 577 ntBASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Rab3c-203ENSMUST00000224180 967 ntBASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1cQ9ES64 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1cQ9ES64 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ush1cQ9ES64 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1cQ9ES64 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1cQ9ES64 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1cQ9ES64 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1cQ9ES64 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1cQ9ES64 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
Ush1cQ9ES64 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.79■□□□□ 0.6
Ush1cQ9ES64 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.79■□□□□ 0.6
Ush1cQ9ES64 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1cQ9ES64 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ush1cQ9ES64 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ush1cQ9ES64 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1cQ9ES64 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1cQ9ES64 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ush1cQ9ES64 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1cQ9ES64 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1cQ9ES64 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1cQ9ES64 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Gm20049-201ENSMUST00000219950 730 ntBASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1cQ9ES64 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms