Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ube3bQ9ES34 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ube3bQ9ES34 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ube3bQ9ES34 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ube3bQ9ES34 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3bQ9ES34 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3bQ9ES34 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3bQ9ES34 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3bQ9ES34 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3bQ9ES34 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3bQ9ES34 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ube3bQ9ES34 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3bQ9ES34 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3bQ9ES34 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3bQ9ES34 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.4■□□□□ 0.7
Ube3bQ9ES34 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ube3bQ9ES34 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3bQ9ES34 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3bQ9ES34 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3bQ9ES34 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3bQ9ES34 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3bQ9ES34 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.4■□□□□ 0.7
Ube3bQ9ES34 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ube3bQ9ES34 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ube3bQ9ES34 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ube3bQ9ES34 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.39■□□□□ 0.7
Ube3bQ9ES34 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Mir6404-201ENSMUST00000183699 94 ntBASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3bQ9ES34 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3bQ9ES34 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ube3bQ9ES34 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3bQ9ES34 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3bQ9ES34 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Ube3bQ9ES34 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3bQ9ES34 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3bQ9ES34 Gm25745-201ENSMUST00000174945 133 ntBASIC19.38■□□□□ 0.69
Ube3bQ9ES34 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3bQ9ES34 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3bQ9ES34 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ube3bQ9ES34 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ube3bQ9ES34 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3bQ9ES34 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ube3bQ9ES34 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ube3bQ9ES34 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3bQ9ES34 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ube3bQ9ES34 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ube3bQ9ES34 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.37■□□□□ 0.69
Ube3bQ9ES34 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.37■□□□□ 0.69
Ube3bQ9ES34 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ube3bQ9ES34 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.37■□□□□ 0.69
Ube3bQ9ES34 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ube3bQ9ES34 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ube3bQ9ES34 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Ube3bQ9ES34 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ube3bQ9ES34 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms