Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ube4bQ9ES00 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Mir5133-201ENSMUST00000174955 77 ntBASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ube4bQ9ES00 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4bQ9ES00 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4bQ9ES00 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4bQ9ES00 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4bQ9ES00 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4bQ9ES00 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Ube4bQ9ES00 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Ube4bQ9ES00 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4bQ9ES00 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4bQ9ES00 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4bQ9ES00 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4bQ9ES00 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4bQ9ES00 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Ube4bQ9ES00 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.77■□□□□ 0.12
Ube4bQ9ES00 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.77■□□□□ 0.12
Ube4bQ9ES00 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4bQ9ES00 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4bQ9ES00 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube4bQ9ES00 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ube4bQ9ES00 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ube4bQ9ES00 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ube4bQ9ES00 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ube4bQ9ES00 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.76■□□□□ 0.11
Ube4bQ9ES00 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ube4bQ9ES00 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4bQ9ES00 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.76■□□□□ 0.11
Ube4bQ9ES00 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4bQ9ES00 Gm12933-201ENSMUST00000120203 872 ntBASIC15.76■□□□□ 0.11
Ube4bQ9ES00 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.76■□□□□ 0.11
Ube4bQ9ES00 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4bQ9ES00 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
Ube4bQ9ES00 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4bQ9ES00 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4bQ9ES00 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4bQ9ES00 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4bQ9ES00 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4bQ9ES00 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4bQ9ES00 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.76■□□□□ 0.11
Ube4bQ9ES00 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ube4bQ9ES00 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube4bQ9ES00 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms