Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtp4Q9ER80 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.33■□□□□ 0.04
Rtp4Q9ER80 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.33■□□□□ 0.04
Rtp4Q9ER80 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtp4Q9ER80 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtp4Q9ER80 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtp4Q9ER80 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rtp4Q9ER80 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rtp4Q9ER80 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtp4Q9ER80 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Rtp4Q9ER80 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rtp4Q9ER80 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtp4Q9ER80 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtp4Q9ER80 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Gm17971-201ENSMUST00000190239 806 ntBASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp4Q9ER80 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp4Q9ER80 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Gm44487-201ENSMUST00000205145 325 ntBASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp4Q9ER80 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rtp4Q9ER80 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms