Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne8Q9DC53 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.09■□□□□ 0.33
Cpne8Q9DC53 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne8Q9DC53 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne8Q9DC53 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Cpne8Q9DC53 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Cpne8Q9DC53 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cpne8Q9DC53 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.08■□□□□ 0.33
Cpne8Q9DC53 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpne8Q9DC53 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cpne8Q9DC53 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpne8Q9DC53 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne8Q9DC53 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne8Q9DC53 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne8Q9DC53 Gm13474-201ENSMUST00000122466 815 ntBASIC17.08■□□□□ 0.32
Cpne8Q9DC53 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne8Q9DC53 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne8Q9DC53 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne8Q9DC53 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne8Q9DC53 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne8Q9DC53 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.08■□□□□ 0.32
Cpne8Q9DC53 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne8Q9DC53 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Cpne8Q9DC53 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.08■□□□□ 0.32
Cpne8Q9DC53 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Mir1668-201ENSMUST00000184114 107 ntBASIC17.07■□□□□ 0.32
Cpne8Q9DC53 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Gm18959-201ENSMUST00000208954 655 ntBASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cpne8Q9DC53 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne8Q9DC53 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne8Q9DC53 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms