Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp2aQ9DB34 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Gm17808-201ENSMUST00000200859 894 ntBASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp2aQ9DB34 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp2aQ9DB34 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp2aQ9DB34 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp2aQ9DB34 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp2aQ9DB34 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Chmp2aQ9DB34 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Chmp2aQ9DB34 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp2aQ9DB34 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp2aQ9DB34 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2aQ9DB34 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2aQ9DB34 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Chmp2aQ9DB34 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2aQ9DB34 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2aQ9DB34 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2aQ9DB34 Gm29518-201ENSMUST00000190858 372 ntBASIC17.08■□□□□ 0.32
Chmp2aQ9DB34 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.08■□□□□ 0.32
Chmp2aQ9DB34 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2aQ9DB34 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2aQ9DB34 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2aQ9DB34 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp2aQ9DB34 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp2aQ9DB34 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Chmp2aQ9DB34 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2aQ9DB34 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2aQ9DB34 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2aQ9DB34 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.06■□□□□ 0.32
Chmp2aQ9DB34 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Chmp2aQ9DB34 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2aQ9DB34 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2aQ9DB34 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Chmp2aQ9DB34 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.06■□□□□ 0.32
Chmp2aQ9DB34 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2aQ9DB34 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2aQ9DB34 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2aQ9DB34 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.06■□□□□ 0.32
Chmp2aQ9DB34 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2aQ9DB34 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms