Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Tmem54Q9D7S1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tmem54Q9D7S1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Tmem54Q9D7S1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tmem54Q9D7S1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Tmem54Q9D7S1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Tmem54Q9D7S1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tmem54Q9D7S1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tmem54Q9D7S1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem54Q9D7S1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem54Q9D7S1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem54Q9D7S1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem54Q9D7S1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem54Q9D7S1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem54Q9D7S1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.33□□□□□ -0.12
Tmem54Q9D7S1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem54Q9D7S1 Gm7284-201ENSMUST00000131667 944 ntBASIC14.33□□□□□ -0.12
Tmem54Q9D7S1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem54Q9D7S1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Tmem54Q9D7S1 Gm44430-201ENSMUST00000203376 995 ntBASIC14.33□□□□□ -0.12
Tmem54Q9D7S1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem54Q9D7S1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem54Q9D7S1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem54Q9D7S1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tmem54Q9D7S1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.33□□□□□ -0.12
Tmem54Q9D7S1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Gm15794-201ENSMUST00000120182 631 ntBASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tmem54Q9D7S1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.31□□□□□ -0.12
Tmem54Q9D7S1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tmem54Q9D7S1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tmem54Q9D7S1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.3□□□□□ -0.12
Tmem54Q9D7S1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tmem54Q9D7S1 Gm14859-201ENSMUST00000117752 357 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms