Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.95□□□□□ -0.02
Upk3bl1Q9D701 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Upk3bl1Q9D701 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Upk3bl1Q9D701 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Upk3bl1Q9D701 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Gm13323-201ENSMUST00000120245 1151 ntBASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Mir6349-201ENSMUST00000184059 97 ntBASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 AC073947.1-201ENSMUST00000216991 649 ntBASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Upk3bl1Q9D701 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Upk3bl1Q9D701 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Upk3bl1Q9D701 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms