Protein–RNA interactions for Protein: Q9D289

Trappc6b, Trafficking protein particle complex subunit 6B, mousemouse

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6bQ9D289 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trappc6bQ9D289 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trappc6bQ9D289 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trappc6bQ9D289 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.32□□□□□ -0.12
Trappc6bQ9D289 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.32□□□□□ -0.12
Trappc6bQ9D289 Gm37025-201ENSMUST00000195159 829 ntBASIC14.32□□□□□ -0.12
Trappc6bQ9D289 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trappc6bQ9D289 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trappc6bQ9D289 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.32□□□□□ -0.12
Trappc6bQ9D289 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trappc6bQ9D289 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trappc6bQ9D289 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.32□□□□□ -0.12
Trappc6bQ9D289 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trappc6bQ9D289 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trappc6bQ9D289 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trappc6bQ9D289 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trappc6bQ9D289 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trappc6bQ9D289 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trappc6bQ9D289 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trappc6bQ9D289 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.29□□□□□ -0.12
Trappc6bQ9D289 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.29□□□□□ -0.12
Trappc6bQ9D289 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trappc6bQ9D289 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trappc6bQ9D289 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trappc6bQ9D289 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trappc6bQ9D289 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trappc6bQ9D289 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trappc6bQ9D289 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trappc6bQ9D289 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trappc6bQ9D289 Gm38027-201ENSMUST00000192315 235 ntBASIC14.29□□□□□ -0.12
Trappc6bQ9D289 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trappc6bQ9D289 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trappc6bQ9D289 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.29□□□□□ -0.12
Trappc6bQ9D289 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms