Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.05■□□□□ -0
Rita1Q9D1H0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Rita1Q9D1H0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rita1Q9D1H0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Rita1Q9D1H0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rita1Q9D1H0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.05■□□□□ -0
Rita1Q9D1H0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rita1Q9D1H0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rita1Q9D1H0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rita1Q9D1H0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rita1Q9D1H0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rita1Q9D1H0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rita1Q9D1H0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.04■□□□□ -0
Rita1Q9D1H0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rita1Q9D1H0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rita1Q9D1H0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rita1Q9D1H0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Rita1Q9D1H0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
Rita1Q9D1H0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Gm34391-201ENSMUST00000203706 907 ntBASIC15.04■□□□□ -0
Rita1Q9D1H0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.04■□□□□ -0
Rita1Q9D1H0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.04■□□□□ -0
Rita1Q9D1H0 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.04■□□□□ -0
Rita1Q9D1H0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rita1Q9D1H0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.04■□□□□ -0
Rita1Q9D1H0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rita1Q9D1H0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rita1Q9D1H0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Rita1Q9D1H0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.03■□□□□ -0
Rita1Q9D1H0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rita1Q9D1H0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rita1Q9D1H0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rita1Q9D1H0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rita1Q9D1H0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rita1Q9D1H0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rita1Q9D1H0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rita1Q9D1H0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rita1Q9D1H0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.03■□□□□ -0
Rita1Q9D1H0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.03■□□□□ -0
Rita1Q9D1H0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rita1Q9D1H0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rita1Q9D1H0 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.03■□□□□ -0
Rita1Q9D1H0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rita1Q9D1H0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rita1Q9D1H0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rita1Q9D1H0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
Rita1Q9D1H0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Rita1Q9D1H0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rita1Q9D1H0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rita1Q9D1H0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Rita1Q9D1H0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rita1Q9D1H0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.02■□□□□ -0
Rita1Q9D1H0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rita1Q9D1H0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rita1Q9D1H0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rita1Q9D1H0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rita1Q9D1H0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Rita1Q9D1H0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Rita1Q9D1H0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Rita1Q9D1H0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Rita1Q9D1H0 Gm27867-201ENSMUST00000184778 125 ntBASIC15.02■□□□□ -0
Rita1Q9D1H0 Gm27741-201ENSMUST00000185060 237 ntBASIC15.02■□□□□ -0
Rita1Q9D1H0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rita1Q9D1H0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Rita1Q9D1H0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rita1Q9D1H0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.02■□□□□ -0
Rita1Q9D1H0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rita1Q9D1H0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rita1Q9D1H0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rita1Q9D1H0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rita1Q9D1H0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rita1Q9D1H0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rita1Q9D1H0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rita1Q9D1H0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rita1Q9D1H0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rita1Q9D1H0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rita1Q9D1H0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rita1Q9D1H0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rita1Q9D1H0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms