Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Gm10517-202ENSMUST00000192970 758 ntBASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim13Q9CYB0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
Trim13Q9CYB0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim13Q9CYB0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim13Q9CYB0 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.17■□□□□ 0.02
Trim13Q9CYB0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim13Q9CYB0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim13Q9CYB0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim13Q9CYB0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim13Q9CYB0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim13Q9CYB0 Gm37292-201ENSMUST00000192062 758 ntBASIC15.17■□□□□ 0.02
Trim13Q9CYB0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim13Q9CYB0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.17■□□□□ 0.02
Trim13Q9CYB0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim13Q9CYB0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim13Q9CYB0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim13Q9CYB0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trim13Q9CYB0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim13Q9CYB0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim13Q9CYB0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Trim13Q9CYB0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Gm12382-201ENSMUST00000122005 922 ntBASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Gm17661-201ENSMUST00000170317 270 ntBASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim13Q9CYB0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim13Q9CYB0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim13Q9CYB0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim13Q9CYB0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim13Q9CYB0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim13Q9CYB0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim13Q9CYB0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim13Q9CYB0 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.15■□□□□ 0.02
Trim13Q9CYB0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim13Q9CYB0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim13Q9CYB0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.15■□□□□ 0.02
Trim13Q9CYB0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trim13Q9CYB0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim13Q9CYB0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
Trim13Q9CYB0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim13Q9CYB0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim13Q9CYB0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim13Q9CYB0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Trim13Q9CYB0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms