Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssu72Q9CY97 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssu72Q9CY97 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ssu72Q9CY97 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.28■□□□□ 0.2
Ssu72Q9CY97 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssu72Q9CY97 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssu72Q9CY97 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssu72Q9CY97 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.28■□□□□ 0.2
Ssu72Q9CY97 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ssu72Q9CY97 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssu72Q9CY97 Gm10602-201ENSMUST00000098239 609 ntBASIC16.28■□□□□ 0.2
Ssu72Q9CY97 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ssu72Q9CY97 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssu72Q9CY97 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssu72Q9CY97 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.28■□□□□ 0.2
Ssu72Q9CY97 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssu72Q9CY97 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssu72Q9CY97 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ssu72Q9CY97 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssu72Q9CY97 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ssu72Q9CY97 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssu72Q9CY97 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssu72Q9CY97 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssu72Q9CY97 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ssu72Q9CY97 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssu72Q9CY97 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ssu72Q9CY97 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.27■□□□□ 0.2
Ssu72Q9CY97 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssu72Q9CY97 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.27■□□□□ 0.2
Ssu72Q9CY97 Gm15378-201ENSMUST00000121894 207 ntBASIC16.27■□□□□ 0.2
Ssu72Q9CY97 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Ssu72Q9CY97 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.27■□□□□ 0.2
Ssu72Q9CY97 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.27■□□□□ 0.2
Ssu72Q9CY97 Gm7791-201ENSMUST00000219066 539 ntBASIC16.27■□□□□ 0.2
Ssu72Q9CY97 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssu72Q9CY97 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ssu72Q9CY97 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ssu72Q9CY97 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ssu72Q9CY97 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssu72Q9CY97 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssu72Q9CY97 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssu72Q9CY97 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssu72Q9CY97 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssu72Q9CY97 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ssu72Q9CY97 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Gm36967-201ENSMUST00000193814 266 ntBASIC16.26■□□□□ 0.19
Ssu72Q9CY97 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ssu72Q9CY97 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.25■□□□□ 0.19
Ssu72Q9CY97 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssu72Q9CY97 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssu72Q9CY97 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ssu72Q9CY97 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ssu72Q9CY97 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ssu72Q9CY97 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ssu72Q9CY97 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssu72Q9CY97 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssu72Q9CY97 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ssu72Q9CY97 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms