Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Mir1668-201ENSMUST00000184114 107 ntBASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Khdc3Q9CWU5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Gm18115-201ENSMUST00000221209 621 ntBASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Khdc3Q9CWU5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Khdc3Q9CWU5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Khdc3Q9CWU5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Khdc3Q9CWU5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Khdc3Q9CWU5 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Khdc3Q9CWU5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 Gm26039-201ENSMUST00000158152 144 ntBASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 Gm9987-201ENSMUST00000069768 567 ntBASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Khdc3Q9CWU5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Khdc3Q9CWU5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.69■□□□□ 0.1
Khdc3Q9CWU5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc3Q9CWU5 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc3Q9CWU5 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc3Q9CWU5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc3Q9CWU5 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.69■□□□□ 0.1
Khdc3Q9CWU5 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc3Q9CWU5 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc3Q9CWU5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc3Q9CWU5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.69■□□□□ 0.1
Khdc3Q9CWU5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Khdc3Q9CWU5 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Khdc3Q9CWU5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.69■□□□□ 0.1
Khdc3Q9CWU5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms