Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sft2d3Q9CSV6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sft2d3Q9CSV6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sft2d3Q9CSV6 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sft2d3Q9CSV6 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.97□□□□□ -0.17
Sft2d3Q9CSV6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sft2d3Q9CSV6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sft2d3Q9CSV6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sft2d3Q9CSV6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sft2d3Q9CSV6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Sft2d3Q9CSV6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sft2d3Q9CSV6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sft2d3Q9CSV6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.96□□□□□ -0.17
Sft2d3Q9CSV6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sft2d3Q9CSV6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Sft2d3Q9CSV6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.96□□□□□ -0.17
Sft2d3Q9CSV6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Sft2d3Q9CSV6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sft2d3Q9CSV6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sft2d3Q9CSV6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sft2d3Q9CSV6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sft2d3Q9CSV6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.18
Sft2d3Q9CSV6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sft2d3Q9CSV6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sft2d3Q9CSV6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Gm10819-201ENSMUST00000099988 561 ntBASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.95□□□□□ -0.18
Sft2d3Q9CSV6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sft2d3Q9CSV6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sft2d3Q9CSV6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.93□□□□□ -0.18
Sft2d3Q9CSV6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sft2d3Q9CSV6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sft2d3Q9CSV6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Sft2d3Q9CSV6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sft2d3Q9CSV6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Sft2d3Q9CSV6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sft2d3Q9CSV6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.93□□□□□ -0.18
Sft2d3Q9CSV6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.93□□□□□ -0.18
Sft2d3Q9CSV6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sft2d3Q9CSV6 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.93□□□□□ -0.18
Sft2d3Q9CSV6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
Sft2d3Q9CSV6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sft2d3Q9CSV6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sft2d3Q9CSV6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sft2d3Q9CSV6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sft2d3Q9CSV6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms