Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Gm43060-201ENSMUST00000200621 289 ntBASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chchd1Q9CQA6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 App-207ENSMUST00000227737 2827 ntBASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chchd1Q9CQA6 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chchd1Q9CQA6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms