Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb1Q9CQ70 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb1Q9CQ70 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb1Q9CQ70 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.41□□□□□ -0.26
H2afb1Q9CQ70 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb1Q9CQ70 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb1Q9CQ70 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
H2afb1Q9CQ70 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Gm37055-201ENSMUST00000191866 133 ntBASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb1Q9CQ70 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Gm7213-201ENSMUST00000215977 950 ntBASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb1Q9CQ70 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Gm29707-201ENSMUST00000196325 491 ntBASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Gm18421-201ENSMUST00000204122 625 ntBASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms