Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nkx6-1Q99MA9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Gm4459-201ENSMUST00000118750 468 ntBASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Gm11780-201ENSMUST00000136880 516 ntBASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkx6-1Q99MA9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Gm25911-201ENSMUST00000157621 56 ntBASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx6-1Q99MA9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Gm12497-201ENSMUST00000138778 237 ntBASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.29■□□□□ 0.04
Nkx6-1Q99MA9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms