Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cstf1Q99LC2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cstf1Q99LC2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Cstf1Q99LC2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cstf1Q99LC2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cstf1Q99LC2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cstf1Q99LC2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cstf1Q99LC2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.33■□□□□ 0.2
Cstf1Q99LC2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cstf1Q99LC2 Gm4995-201ENSMUST00000117247 432 ntBASIC16.33■□□□□ 0.2
Cstf1Q99LC2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cstf1Q99LC2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cstf1Q99LC2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.33■□□□□ 0.2
Cstf1Q99LC2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cstf1Q99LC2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cstf1Q99LC2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cstf1Q99LC2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cstf1Q99LC2 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.33■□□□□ 0.2
Cstf1Q99LC2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cstf1Q99LC2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cstf1Q99LC2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cstf1Q99LC2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cstf1Q99LC2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.33■□□□□ 0.2
Cstf1Q99LC2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Gm14140-201ENSMUST00000119999 995 ntBASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cstf1Q99LC2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cstf1Q99LC2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cstf1Q99LC2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.31■□□□□ 0.2
Cstf1Q99LC2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cstf1Q99LC2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cstf1Q99LC2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cstf1Q99LC2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cstf1Q99LC2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Cstf1Q99LC2 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cstf1Q99LC2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.31■□□□□ 0.2
Cstf1Q99LC2 Gm7506-201ENSMUST00000207758 815 ntBASIC16.31■□□□□ 0.2
Cstf1Q99LC2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cstf1Q99LC2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cstf1Q99LC2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cstf1Q99LC2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cstf1Q99LC2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cstf1Q99LC2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cstf1Q99LC2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cstf1Q99LC2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cstf1Q99LC2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cstf1Q99LC2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cstf1Q99LC2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cstf1Q99LC2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cstf1Q99LC2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.3■□□□□ 0.2
Cstf1Q99LC2 Gm26308-201ENSMUST00000157768 69 ntBASIC16.3■□□□□ 0.2
Cstf1Q99LC2 Gm9727-201ENSMUST00000161387 555 ntBASIC16.3■□□□□ 0.2
Cstf1Q99LC2 Auts2-212ENSMUST00000178555 309 ntBASIC16.3■□□□□ 0.2
Cstf1Q99LC2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.3■□□□□ 0.2
Cstf1Q99LC2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.3■□□□□ 0.2
Cstf1Q99LC2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.3■□□□□ 0.2
Cstf1Q99LC2 AV026068-213ENSMUST00000223675 1171 ntBASIC16.3■□□□□ 0.2
Cstf1Q99LC2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cstf1Q99LC2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cstf1Q99LC2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cstf1Q99LC2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cstf1Q99LC2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cstf1Q99LC2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cstf1Q99LC2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cstf1Q99LC2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms