Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Rfc4Q99J62 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfc4Q99J62 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfc4Q99J62 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfc4Q99J62 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfc4Q99J62 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Gm6736-201ENSMUST00000166583 948 ntBASIC18.83■□□□□ 0.6
Rfc4Q99J62 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc4Q99J62 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc4Q99J62 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rfc4Q99J62 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.82■□□□□ 0.6
Rfc4Q99J62 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.82■□□□□ 0.6
Rfc4Q99J62 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.82■□□□□ 0.6
Rfc4Q99J62 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.82■□□□□ 0.6
Rfc4Q99J62 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.82■□□□□ 0.6
Rfc4Q99J62 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc4Q99J62 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.82■□□□□ 0.6
Rfc4Q99J62 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfc4Q99J62 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rfc4Q99J62 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc4Q99J62 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Rfc4Q99J62 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc4Q99J62 Gm12260-201ENSMUST00000122447 411 ntBASIC18.81■□□□□ 0.6
Rfc4Q99J62 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc4Q99J62 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc4Q99J62 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.81■□□□□ 0.6
Rfc4Q99J62 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.81■□□□□ 0.6
Rfc4Q99J62 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.81■□□□□ 0.6
Rfc4Q99J62 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.81■□□□□ 0.6
Rfc4Q99J62 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.81■□□□□ 0.6
Rfc4Q99J62 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.81■□□□□ 0.6
Rfc4Q99J62 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.81■□□□□ 0.6
Rfc4Q99J62 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rfc4Q99J62 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc4Q99J62 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc4Q99J62 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc4Q99J62 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc4Q99J62 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc4Q99J62 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfc4Q99J62 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfc4Q99J62 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfc4Q99J62 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.8■□□□□ 0.6
Rfc4Q99J62 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfc4Q99J62 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfc4Q99J62 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.8■□□□□ 0.6
Rfc4Q99J62 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.8■□□□□ 0.6
Rfc4Q99J62 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfc4Q99J62 AV026068-213ENSMUST00000223675 1171 ntBASIC18.8■□□□□ 0.6
Rfc4Q99J62 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.8■□□□□ 0.6
Rfc4Q99J62 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfc4Q99J62 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Rfc4Q99J62 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rfc4Q99J62 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfc4Q99J62 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfc4Q99J62 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rfc4Q99J62 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfc4Q99J62 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfc4Q99J62 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfc4Q99J62 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfc4Q99J62 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfc4Q99J62 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rfc4Q99J62 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.79■□□□□ 0.6
Rfc4Q99J62 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms