Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b3Q921M3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b3Q921M3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b3Q921M3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b3Q921M3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b3Q921M3 Gm14494-201ENSMUST00000118786 435 ntBASIC19.63■□□□□ 0.73
Sf3b3Q921M3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b3Q921M3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.63■□□□□ 0.73
Sf3b3Q921M3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.63■□□□□ 0.73
Sf3b3Q921M3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b3Q921M3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sf3b3Q921M3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sf3b3Q921M3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b3Q921M3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sf3b3Q921M3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Rarb-207ENSMUST00000225921 2756 ntBASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Gm12260-201ENSMUST00000122447 411 ntBASIC19.62■□□□□ 0.73
Sf3b3Q921M3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b3Q921M3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Sf3b3Q921M3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b3Q921M3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b3Q921M3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.61■□□□□ 0.73
Sf3b3Q921M3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b3Q921M3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sf3b3Q921M3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.61■□□□□ 0.73
Sf3b3Q921M3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b3Q921M3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.61■□□□□ 0.73
Sf3b3Q921M3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b3Q921M3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.61■□□□□ 0.73
Sf3b3Q921M3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Sf3b3Q921M3 Gm2213-201ENSMUST00000197485 688 ntBASIC19.61■□□□□ 0.73
Sf3b3Q921M3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b3Q921M3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b3Q921M3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b3Q921M3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b3Q921M3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b3Q921M3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b3Q921M3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sf3b3Q921M3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Sf3b3Q921M3 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.6■□□□□ 0.73
Sf3b3Q921M3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b3Q921M3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b3Q921M3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b3Q921M3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Sf3b3Q921M3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.6■□□□□ 0.73
Sf3b3Q921M3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b3Q921M3 Gm27646-201ENSMUST00000183989 110 ntBASIC19.6■□□□□ 0.73
Sf3b3Q921M3 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.6■□□□□ 0.73
Sf3b3Q921M3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b3Q921M3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b3Q921M3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Sf3b3Q921M3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Sf3b3Q921M3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Gm8825-201ENSMUST00000182565 998 ntBASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Gm4518-201ENSMUST00000182638 718 ntBASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3b3Q921M3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms