Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.21■□□□□ 0.34
Pcdha11Q91Y19 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdha11Q91Y19 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Gm28033-201ENSMUST00000184224 96 ntBASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdha11Q91Y19 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha11Q91Y19 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha11Q91Y19 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha11Q91Y19 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha11Q91Y19 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha11Q91Y19 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha11Q91Y19 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha11Q91Y19 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.19■□□□□ 0.34
Pcdha11Q91Y19 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcdha11Q91Y19 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha11Q91Y19 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdha11Q91Y19 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Pcdha11Q91Y19 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha11Q91Y19 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha11Q91Y19 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha11Q91Y19 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Pcdha11Q91Y19 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.18■□□□□ 0.34
Pcdha11Q91Y19 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha11Q91Y19 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha11Q91Y19 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdha11Q91Y19 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdha11Q91Y19 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdha11Q91Y19 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdha11Q91Y19 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha11Q91Y19 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdha11Q91Y19 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha11Q91Y19 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.17■□□□□ 0.34
Pcdha11Q91Y19 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdha11Q91Y19 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdha11Q91Y19 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdha11Q91Y19 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.17■□□□□ 0.34
Pcdha11Q91Y19 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha11Q91Y19 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha11Q91Y19 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha11Q91Y19 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdha11Q91Y19 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha11Q91Y19 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha11Q91Y19 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms