Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha3Q91Y16 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdha3Q91Y16 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pcdha3Q91Y16 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdha3Q91Y16 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha3Q91Y16 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdha3Q91Y16 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdha3Q91Y16 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdha3Q91Y16 Gm33142-201ENSMUST00000193913 867 ntBASIC17.12■□□□□ 0.33
Pcdha3Q91Y16 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdha3Q91Y16 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.12■□□□□ 0.33
Pcdha3Q91Y16 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha3Q91Y16 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha3Q91Y16 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha3Q91Y16 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha3Q91Y16 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha3Q91Y16 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha3Q91Y16 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha3Q91Y16 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdha3Q91Y16 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha3Q91Y16 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha3Q91Y16 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha3Q91Y16 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha3Q91Y16 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha3Q91Y16 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha3Q91Y16 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha3Q91Y16 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha3Q91Y16 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.11■□□□□ 0.33
Pcdha3Q91Y16 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdha3Q91Y16 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdha3Q91Y16 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha3Q91Y16 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha3Q91Y16 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdha3Q91Y16 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdha3Q91Y16 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha3Q91Y16 Phf7-203ENSMUST00000226565 1971 ntBASIC17.11■□□□□ 0.33
Pcdha3Q91Y16 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha3Q91Y16 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha3Q91Y16 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha3Q91Y16 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha3Q91Y16 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha3Q91Y16 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha3Q91Y16 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha3Q91Y16 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha3Q91Y16 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha3Q91Y16 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha3Q91Y16 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha3Q91Y16 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha3Q91Y16 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.1■□□□□ 0.33
Pcdha3Q91Y16 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha3Q91Y16 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha3Q91Y16 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha3Q91Y16 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha3Q91Y16 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha3Q91Y16 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms