Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb4Q91XZ6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb4Q91XZ6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb4Q91XZ6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb4Q91XZ6 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb4Q91XZ6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhb4Q91XZ6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhb4Q91XZ6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb4Q91XZ6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb4Q91XZ6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.24■□□□□ 0.19
Pcdhb4Q91XZ6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms