Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb5Q91XZ5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb5Q91XZ5 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.26■□□□□ 0.67
Pcdhb5Q91XZ5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.26■□□□□ 0.67
Pcdhb5Q91XZ5 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb5Q91XZ5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Pcdhb5Q91XZ5 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcdhb5Q91XZ5 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcdhb5Q91XZ5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb5Q91XZ5 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb5Q91XZ5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb5Q91XZ5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb5Q91XZ5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhb5Q91XZ5 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Gm12497-201ENSMUST00000138778 237 ntBASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Mir5126-201ENSMUST00000175513 77 ntBASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb5Q91XZ5 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Rarb-207ENSMUST00000225921 2756 ntBASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Gm4459-201ENSMUST00000118750 468 ntBASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Gm7230-201ENSMUST00000173026 815 ntBASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb5Q91XZ5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb5Q91XZ5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb5Q91XZ5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb5Q91XZ5 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb5Q91XZ5 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb5Q91XZ5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb5Q91XZ5 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.23■□□□□ 0.67
Pcdhb5Q91XZ5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb5Q91XZ5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb5Q91XZ5 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb5Q91XZ5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb5Q91XZ5 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb5Q91XZ5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb5Q91XZ5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb5Q91XZ5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 Gm15173-201ENSMUST00000122049 433 ntBASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 Gm5364-201ENSMUST00000216789 889 ntBASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 Gm8655-201ENSMUST00000221159 852 ntBASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms