Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb8Q91XZ2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb8Q91XZ2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdhb8Q91XZ2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16■□□□□ 0.15
Pcdhb8Q91XZ2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdhb8Q91XZ2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb8Q91XZ2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb8Q91XZ2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb8Q91XZ2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16■□□□□ 0.15
Pcdhb8Q91XZ2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb8Q91XZ2 Gm8668-201ENSMUST00000120559 1447 ntBASIC16■□□□□ 0.15
Pcdhb8Q91XZ2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb8Q91XZ2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb8Q91XZ2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16■□□□□ 0.15
Pcdhb8Q91XZ2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb8Q91XZ2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb8Q91XZ2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb8Q91XZ2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb8Q91XZ2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb8Q91XZ2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb8Q91XZ2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Gm18421-201ENSMUST00000204122 625 ntBASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms