Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga9Q91XX9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga9Q91XX9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga9Q91XX9 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Gm17971-201ENSMUST00000190239 806 ntBASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhga9Q91XX9 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Gm6623-201ENSMUST00000173570 544 ntBASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga9Q91XX9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms