Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trex1Q91XB0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trex1Q91XB0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trex1Q91XB0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trex1Q91XB0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trex1Q91XB0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.71■□□□□ 0.59
Trex1Q91XB0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trex1Q91XB0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trex1Q91XB0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trex1Q91XB0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.71■□□□□ 0.59
Trex1Q91XB0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.71■□□□□ 0.59
Trex1Q91XB0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trex1Q91XB0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trex1Q91XB0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.71■□□□□ 0.59
Trex1Q91XB0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.71■□□□□ 0.59
Trex1Q91XB0 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.71■□□□□ 0.59
Trex1Q91XB0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trex1Q91XB0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trex1Q91XB0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trex1Q91XB0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trex1Q91XB0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trex1Q91XB0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trex1Q91XB0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trex1Q91XB0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Trex1Q91XB0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trex1Q91XB0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trex1Q91XB0 Gm25406-201ENSMUST00000157599 105 ntBASIC18.7■□□□□ 0.58
Trex1Q91XB0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.7■□□□□ 0.58
Trex1Q91XB0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trex1Q91XB0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trex1Q91XB0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trex1Q91XB0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trex1Q91XB0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trex1Q91XB0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Trex1Q91XB0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trex1Q91XB0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trex1Q91XB0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trex1Q91XB0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.69■□□□□ 0.58
Trex1Q91XB0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trex1Q91XB0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trex1Q91XB0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trex1Q91XB0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trex1Q91XB0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trex1Q91XB0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trex1Q91XB0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.69■□□□□ 0.58
Trex1Q91XB0 Gm11780-201ENSMUST00000136880 516 ntBASIC18.69■□□□□ 0.58
Trex1Q91XB0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.69■□□□□ 0.58
Trex1Q91XB0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
Trex1Q91XB0 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.69■□□□□ 0.58
Trex1Q91XB0 Gm5364-201ENSMUST00000216789 889 ntBASIC18.69■□□□□ 0.58
Trex1Q91XB0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.69■□□□□ 0.58
Trex1Q91XB0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Trex1Q91XB0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trex1Q91XB0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trex1Q91XB0 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.69■□□□□ 0.58
Trex1Q91XB0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trex1Q91XB0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
Trex1Q91XB0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trex1Q91XB0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.69■□□□□ 0.58
Trex1Q91XB0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trex1Q91XB0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trex1Q91XB0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Gm9172-201ENSMUST00000212092 954 ntBASIC18.68■□□□□ 0.58
Trex1Q91XB0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trex1Q91XB0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.68■□□□□ 0.58
Trex1Q91XB0 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.68■□□□□ 0.58
Trex1Q91XB0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms