Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Mir8098-201ENSMUST00000184011 137 ntBASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Gm27742-201ENSMUST00000184667 60 ntBASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Gm29707-201ENSMUST00000196325 491 ntBASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx1Q91VR5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx1Q91VR5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx1Q91VR5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Ddx1Q91VR5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx1Q91VR5 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Ddx1Q91VR5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.89■□□□□ 0.29
Ddx1Q91VR5 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx1Q91VR5 Gm37935-201ENSMUST00000192012 982 ntBASIC16.89■□□□□ 0.29
Ddx1Q91VR5 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.89■□□□□ 0.29
Ddx1Q91VR5 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.89■□□□□ 0.29
Ddx1Q91VR5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx1Q91VR5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx1Q91VR5 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx1Q91VR5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx1Q91VR5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx1Q91VR5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx1Q91VR5 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ddx1Q91VR5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Birc2-201ENSMUST00000054878 378 ntBASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.88■□□□□ 0.29
Ddx1Q91VR5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx1Q91VR5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx1Q91VR5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx1Q91VR5 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx1Q91VR5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx1Q91VR5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx1Q91VR5 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.87■□□□□ 0.29
Ddx1Q91VR5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx1Q91VR5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx1Q91VR5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.87■□□□□ 0.29
Ddx1Q91VR5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx1Q91VR5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Ddx1Q91VR5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx1Q91VR5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx1Q91VR5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx1Q91VR5 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx1Q91VR5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx1Q91VR5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx1Q91VR5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx1Q91VR5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx1Q91VR5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx1Q91VR5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.86■□□□□ 0.29
Ddx1Q91VR5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx1Q91VR5 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.86■□□□□ 0.29
Ddx1Q91VR5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx1Q91VR5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx1Q91VR5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx1Q91VR5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx1Q91VR5 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx1Q91VR5 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx1Q91VR5 Gm18733-201ENSMUST00000173950 856 ntBASIC16.86■□□□□ 0.29
Ddx1Q91VR5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ddx1Q91VR5 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.86■□□□□ 0.29
Ddx1Q91VR5 Gm45328-201ENSMUST00000210942 917 ntBASIC16.86■□□□□ 0.29
Ddx1Q91VR5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx1Q91VR5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.86■□□□□ 0.29
Ddx1Q91VR5 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx1Q91VR5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx1Q91VR5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms