Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ddx41Q91VN6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx41Q91VN6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ddx41Q91VN6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.59
Ddx41Q91VN6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ddx41Q91VN6 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ddx41Q91VN6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Gm15794-201ENSMUST00000120182 631 ntBASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Ddx41Q91VN6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx41Q91VN6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx41Q91VN6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx41Q91VN6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx41Q91VN6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx41Q91VN6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx41Q91VN6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx41Q91VN6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx41Q91VN6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.75■□□□□ 0.59
Ddx41Q91VN6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.75■□□□□ 0.59
Ddx41Q91VN6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx41Q91VN6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx41Q91VN6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx41Q91VN6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx41Q91VN6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx41Q91VN6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx41Q91VN6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx41Q91VN6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
Ddx41Q91VN6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx41Q91VN6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx41Q91VN6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx41Q91VN6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms