Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vsx1Q91V10 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Gm15173-201ENSMUST00000122049 433 ntBASIC16.17■□□□□ 0.18
Vsx1Q91V10 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Vsx1Q91V10 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vsx1Q91V10 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Gm25990-201ENSMUST00000102440 86 ntBASIC16.16■□□□□ 0.18
Vsx1Q91V10 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.16■□□□□ 0.18
Vsx1Q91V10 Gm13418-201ENSMUST00000119097 944 ntBASIC16.16■□□□□ 0.18
Vsx1Q91V10 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Gm15590-201ENSMUST00000078419 552 ntBASIC16.16■□□□□ 0.18
Vsx1Q91V10 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vsx1Q91V10 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vsx1Q91V10 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vsx1Q91V10 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vsx1Q91V10 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Gm7230-201ENSMUST00000173026 815 ntBASIC16.14■□□□□ 0.17
Vsx1Q91V10 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Vsx1Q91V10 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.14■□□□□ 0.17
Vsx1Q91V10 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vsx1Q91V10 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms