Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Gm21814-202ENSMUST00000203277 873 ntBASIC16.95■□□□□ 0.3
Trim60Q8VI40 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim60Q8VI40 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.94■□□□□ 0.3
Trim60Q8VI40 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim60Q8VI40 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.93■□□□□ 0.3
Trim60Q8VI40 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.93■□□□□ 0.3
Trim60Q8VI40 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim60Q8VI40 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim60Q8VI40 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim60Q8VI40 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim60Q8VI40 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim60Q8VI40 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim60Q8VI40 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Trim60Q8VI40 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim60Q8VI40 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim60Q8VI40 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim60Q8VI40 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim60Q8VI40 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim60Q8VI40 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim60Q8VI40 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim60Q8VI40 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
Trim60Q8VI40 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim60Q8VI40 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim60Q8VI40 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim60Q8VI40 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim60Q8VI40 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim60Q8VI40 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.91■□□□□ 0.3
Trim60Q8VI40 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim60Q8VI40 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 367.8 ms