Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cspg4Q8VHY0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cspg4Q8VHY0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cspg4Q8VHY0 Gm7222-201ENSMUST00000117512 906 ntBASIC14.02□□□□□ -0.16
Cspg4Q8VHY0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.02□□□□□ -0.16
Cspg4Q8VHY0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cspg4Q8VHY0 Gm5312-201ENSMUST00000203728 547 ntBASIC14.02□□□□□ -0.16
Cspg4Q8VHY0 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.02□□□□□ -0.16
Cspg4Q8VHY0 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.02□□□□□ -0.16
Cspg4Q8VHY0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cspg4Q8VHY0 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.02□□□□□ -0.16
Cspg4Q8VHY0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 Gm13823-201ENSMUST00000119930 345 ntBASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 Gm11764-201ENSMUST00000120221 623 ntBASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cspg4Q8VHY0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Gm25406-201ENSMUST00000157599 105 ntBASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cspg4Q8VHY0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg4Q8VHY0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cspg4Q8VHY0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg4Q8VHY0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Cspg4Q8VHY0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cspg4Q8VHY0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Cspg4Q8VHY0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cspg4Q8VHY0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cspg4Q8VHY0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms