Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.98■□□□□ 0.47
Rpap2Q8VC34 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpap2Q8VC34 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpap2Q8VC34 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpap2Q8VC34 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rpap2Q8VC34 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpap2Q8VC34 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rpap2Q8VC34 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpap2Q8VC34 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpap2Q8VC34 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpap2Q8VC34 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpap2Q8VC34 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.98■□□□□ 0.47
Rpap2Q8VC34 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rpap2Q8VC34 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpap2Q8VC34 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rpap2Q8VC34 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpap2Q8VC34 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpap2Q8VC34 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpap2Q8VC34 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpap2Q8VC34 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rpap2Q8VC34 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpap2Q8VC34 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.97■□□□□ 0.47
Rpap2Q8VC34 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpap2Q8VC34 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rpap2Q8VC34 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Rpap2Q8VC34 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpap2Q8VC34 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpap2Q8VC34 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rpap2Q8VC34 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rpap2Q8VC34 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Gm17808-201ENSMUST00000200859 894 ntBASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Gm44430-201ENSMUST00000203376 995 ntBASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Gm45328-201ENSMUST00000210942 917 ntBASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpap2Q8VC34 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpap2Q8VC34 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Rpap2Q8VC34 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Rpap2Q8VC34 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Gm10052-201ENSMUST00000168019 960 ntBASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Gm7729-201ENSMUST00000050143 801 ntBASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpap2Q8VC34 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms