Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Cd109Q8R422 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cd109Q8R422 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cd109Q8R422 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cd109Q8R422 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cd109Q8R422 Gm12260-201ENSMUST00000122447 411 ntBASIC23.12■■□□□ 1.29
Cd109Q8R422 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC23.12■■□□□ 1.29
Cd109Q8R422 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC23.12■■□□□ 1.29
Cd109Q8R422 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC23.12■■□□□ 1.29
Cd109Q8R422 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC23.12■■□□□ 1.29
Cd109Q8R422 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cd109Q8R422 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cd109Q8R422 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Cd109Q8R422 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cd109Q8R422 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Cd109Q8R422 AC122901.1-201ENSMUST00000214203 1790 ntBASIC23.12■■□□□ 1.29
Cd109Q8R422 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cd109Q8R422 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cd109Q8R422 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Cd109Q8R422 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cd109Q8R422 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cd109Q8R422 Gm5682-201ENSMUST00000173402 505 ntBASIC23.11■■□□□ 1.29
Cd109Q8R422 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC23.11■■□□□ 1.29
Cd109Q8R422 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC23.11■■□□□ 1.29
Cd109Q8R422 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Cd109Q8R422 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cd109Q8R422 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cd109Q8R422 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cd109Q8R422 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cd109Q8R422 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
Cd109Q8R422 Gm14494-201ENSMUST00000118786 435 ntBASIC23.1■■□□□ 1.29
Cd109Q8R422 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Cd109Q8R422 Gm9727-201ENSMUST00000161387 555 ntBASIC23.1■■□□□ 1.29
Cd109Q8R422 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Cd109Q8R422 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cd109Q8R422 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cd109Q8R422 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC23.1■■□□□ 1.29
Cd109Q8R422 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC23.1■■□□□ 1.29
Cd109Q8R422 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Cd109Q8R422 AC131586.3-201ENSMUST00000228355 1367 ntBASIC23.1■■□□□ 1.29
Cd109Q8R422 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cd109Q8R422 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cd109Q8R422 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cd109Q8R422 Gm8839-201ENSMUST00000121279 1645 ntBASIC23.1■■□□□ 1.29
Cd109Q8R422 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cd109Q8R422 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cd109Q8R422 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cd109Q8R422 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC23.09■■□□□ 1.29
Cd109Q8R422 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC23.09■■□□□ 1.29
Cd109Q8R422 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cd109Q8R422 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cd109Q8R422 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cd109Q8R422 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cd109Q8R422 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cd109Q8R422 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cd109Q8R422 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Cd109Q8R422 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cd109Q8R422 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC23.09■■□□□ 1.29
Cd109Q8R422 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cd109Q8R422 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cd109Q8R422 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cd109Q8R422 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cd109Q8R422 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cd109Q8R422 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cd109Q8R422 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC23.08■■□□□ 1.29
Cd109Q8R422 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC23.08■■□□□ 1.29
Cd109Q8R422 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Cd109Q8R422 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cd109Q8R422 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cd109Q8R422 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.29
Cd109Q8R422 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Cd109Q8R422 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cd109Q8R422 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cd109Q8R422 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cd109Q8R422 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Cd109Q8R422 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC23.08■■□□□ 1.28
Cd109Q8R422 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC23.08■■□□□ 1.28
Cd109Q8R422 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC23.08■■□□□ 1.28
Cd109Q8R422 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.28
Cd109Q8R422 Gm43294-201ENSMUST00000202850 2490 ntBASIC23.07■■□□□ 1.28
Cd109Q8R422 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC23.07■■□□□ 1.28
Cd109Q8R422 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cd109Q8R422 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cd109Q8R422 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Cd109Q8R422 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cd109Q8R422 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cd109Q8R422 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cd109Q8R422 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Cd109Q8R422 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cd109Q8R422 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Cd109Q8R422 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Cd109Q8R422 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC23.07■■□□□ 1.28
Cd109Q8R422 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC23.07■■□□□ 1.28
Cd109Q8R422 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Cd109Q8R422 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cd109Q8R422 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC23.07■■□□□ 1.28
Cd109Q8R422 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC23.06■■□□□ 1.28
Cd109Q8R422 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cd109Q8R422 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Cd109Q8R422 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms